Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAADRVMQSYGRCCA-STGFFDDFYRHFLASSPQIRAKFATTD-------MTAQKHLLRAGIMNLVMYARGMSDSKLRALGASHSRAALDIRPELYDLWLDALLMAVAEHD-RDCDAETRDAWRDVMGRGIAVIKSYY
3W4U Chain:A ((6-141))
-TERTIIVSMWAKISTQADTIGTETLERLFLSHPQTKTYFPHFDLHPGSAQLRAHGSKVVAAVGDAVKSIDDI-GGALSKLSELHAYI-LRVDPVNFKLLSHCLLVTLAARFPADFTAEAHAAWDKFLSVVSSVLTEKY
General information:
TITO was launched using:
RESULT:
Template:
3W4U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71096 for 892 contacts (-79.7/contact) +
2D Compatibility (PS) -13559 + (NN) -6491 + (LL) 324
1D Compatibility (HY) -7600 + (ID) 1200
Total energy: -99622.0 ( -111.68 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_3W4U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W4U-query.scw
PDB file :
Tito_Scwrl_3W4U.pdb
: