Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNITTIAKRLSLLVLFIAPTAGWAAESMVPAPPQLAAKSYVLMDGESGQVLVENNGDQRLPPASLTKLMTAYIATKEIEAGRIGENDLVTVSEHAWRTG---GSRMFIKVGSQVSVSDLLHGIIIQSGNDASVALAEHIAGSEDAFADMMNTTAQKLGLTNSHFMDATGLPNPDHYSSARDMAVLARAIIYGEPSHYAIYAQKEFLWNNIKQPNRNLLLWRDK-TVDGLKTGHTDEAGYCLVASAVRDGQRMIAVVFGTNSEQARAAETQKLLTYGFRFFESRNFYKKGTELTKGLVWKGSEHEVKAGLAEDLTMTLPRGQMQKLQASMVLE-PQLMAPIQQGQVIGKVEVKLDDKVIRSADLVALNAVEEGGFFRRLWDSIRLFFYGLFN |
4DRT Chain:A ((7-358)) | -------------------------KTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRRDPALLAHMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNKGASLMFLKPGMQVPVSQLIRGINLQDGADAAVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVSGGDADGQYSSARDMALIGQALIRDVPNEYSIFKEKEFTFNGIRQLNRNGLLWDNSLNVDGIMTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTINFQLDGKTIEQRPLVVLQEIPEGNF----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160252 for 2923 contacts (-54.8/contact) +
2D Compatibility (PS) -36776 + (NN) -7976 + (LL) 4076
1D Compatibility (HY) -30000 + (ID) 8100
Total energy: -239028.0 ( -81.77 by residue)
QMean score : 0.489
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