Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLSRRIPAALSPFQNRVIGACLLGGLLAAGAPAQAEEATGNARWVSDSLTTFVRSGPTDGYRIVGTLTSGQKVELLGTQGNYSQVRGENGSTVWIPSRDLQEVPGQAERLPQLEQKVAALTAELDGINDTWKTRVQGMQETLDTRKKLIDELQAARSNLDAELGKARSDLRAVQAQLGDENKQVLMRYMVYGGSIAGAGLFAGLILPSLLRVRRKRNDKWF |
| 3ITO Chain:A ((172-215)) | ---------------------------------------------------------------------------------------GSKALTVWIG--DGSNFPGQSNFTRAFERYLSAMAEIYKGLPDDWK----------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ITO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6542 for 174 contacts (37.6/contact) +
2D Compatibility (PS) -5106 + (NN) -5213 + (LL) 11612
1D Compatibility (HY) -3200 + (ID) 750
Total energy: 3885.0 ( 22.33 by residue)
QMean score : 0.531
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