Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTLLKLLQDGR--FHSGEELGAVLGISRSAVWKRLQHLEAEHGLQFHKVRGRGYRLASPLSLLDPRKID------SLWPV-EIMPTVDSTNSEAMRRLAAGASTPFVIVAEQQTAGRGRRGRAWVSPYGENLYYSLAITVRGGARELEGLSLVVGLAVLRALESLGVQDTGLKWPNDLLQGGKKIAGILLELSGDPADLCHVVIGIGINVNMKTAT---DIGQPWTSLREALGELVDRSRLLSALNRQLADYLDRHSREGFAASREEW-ESCNLWQGAQVILSTALSSIEGRVLGVDSRGALRLEVDGVEQGFSGGELSLRLRQ |
| 3V8L Chain:A ((12-310)) | -QDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLE-GCKIDSVNHKGHLLQQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLV-GNQSSFFILSDEQTKGRGRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPNDIYIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLDRYQFLERLLQEIEKRYNQFLTLPFSEIREEYIAASNIWNRT-LLFTENDKQFKGQAIDLDYDGYL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131829 for 2150 contacts (-61.3/contact) +
2D Compatibility (PS) -30702 + (NN) -11789 + (LL) 1768
1D Compatibility (HY) -23200 + (ID) 3850
Total energy: -199602.0 ( -92.84 by residue)
QMean score : 0.481
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