Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQANELLIGAGPDGQPVGQAWRLANRHGLIAGATGTGKTVTLQHLAESFSDAG--VAVFAADIKGDLCGIAAPGNPQGKVAERIASMPWLNYQPKAYPTTLWDIAGKTGHPLRTTISEMGPLLLANLLELTDSQQAALFAAFQVADREGLLLLDLKDLKALLNHLKDNPEILGEDRALFTGASGQALLRRLATLEQQGAEAFFGEPALQLEDILRPEPDGRGRIHLLDASRLVHEAPKVYATFLLWLLAELFEQLPERGDADKPVLALFFDEAHLLFNGTPKALRDRLEQVVRLIRSKGVGVYFVTQSPGDLPDDVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPAFDTLGVLTELGIGEALVGTLEEKGTPAMVQRVAVAPPYSRIGPLSDSERAELVQRSPLKGRYDQPIDRESAYEVLANKAGAKPEVQGQATAQQESSSGVGGMAGQILGSLLSNSTVKSAMRQAANQLSRELVRGLLGSLMGGKKRR
3NXS Chain:A ((42-138))--QAQQLLLDLMPEA---GSA-----MHVGITGVPGVGKSTTIEALGMHLIEAGHRVAVLAVD----------------RMA-RLAVHPDAYIRPSPTSGTLGGVAKAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3NXS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20832 for 405 contacts (-51.4/contact) +
2D Compatibility (PS) -8623 + (NN) -4647 + (LL) 27024
1D Compatibility (HY) -3200 + (ID) 1550
Total energy: -11828.0 ( -29.20 by residue)
QMean score : 0.108

(partial model without unconserved sides chains):
PDB file : Tito_3NXS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NXS-query.scw
PDB file : Tito_Scwrl_3NXS.pdb: