Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRMPLATASLLALAISLAGCGDDKKAEAPATPAASTQPAAPAAAPAAKVDEAAAKAVIKNYAD-LAEATFADALSTAKDLQKAIDAFLAKP--DAETLKAAKEAWFAARTPYSQSEAFRFGNAIIDD--WEGQVNAWPLDEGLIDYVAKDYQHALGNPGATANIVANTEIQVGEDKIDVKEITGEKLASLNELGGSEANVATGYHAIEFLLWGQDLNGTGPGAGNRPATDYAQGKDCTGGHCDRRAAYLKAVTDLLVSDLEYMAGQWKAGVADNYRAKLEAEPVDTGLRKMFFGMGSLSLGELAGERMKVALEAN--STEDEHDCFSDDTHHTLFFNGKSIRNIYLGEYKRIDGSVVKGPSLADLVAKADA-AANDTLKADLADTEAKLQAIVDSAEKDGVHFDQMIAPDNKDGQQKIRDAIAALVKQTGAIE-QAAGKLGIQDLKPDNADHEF |
| 3PF0 Chain:A ((70-383)) | ------------------------------------------------DISAETEKTYLTHVANDMVIPAYADAAKQSDLLHDLAQKHCQKAPVSGDELQALRDQWLVLAQAWASAEMVNF--GPATASMSNLYINYYPDERGLVHGGVAD-------------LITA-----------NPALTAEQLAN-------ESAVVQGIPGLEEALYANDS------------------------LDAGQCAYVMSASSALGTRLKDIEKNWQQNA-IKLLAIDKTAESDQGLNQWFNSLLS-LVETMKSNAIEQPLGLSGKAKGHLPAATAGQSRAIINAKLATLNKAMTDP------------VLTAILGSNNENTVADTLSTALADTTALLAQMP-------EDLATA-------DKATQQELYDHLTNITRLIKSQLIPTLGIRVGF-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PF0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 54820 for 2372 contacts (23.1/contact) +
2D Compatibility (PS) -31220 + (NN) -8351 + (LL) 4204
1D Compatibility (HY) 12000 + (ID) 1150
Total energy: 30303.0 ( 12.78 by residue)
QMean score : 0.272
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