Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVEAAKNARELLLKEYRAVLSTHSKKWPGFPFGSVVPYCLDAEGRPLILISRIAQHTHNLQADP-RCSMLVGERGA--EDIQAVGRLTLLAEARQLAEE-EVAAAAERYYRYFPES---ADYHRVHDFDFWVLQPVQWRFIGGFGAIHWLAAERVPLANPFAGEAERGMVEHMNSDHAAAIAHYVELAGLPAHAAAQLAGIDTEGFHLRIGQGLHWLPFPAACGNPGAVRQALVQLARAERWPTVEPEQG |
| 3GAS Chain:A ((85-238)) | --KGVEEEVKAFKEGFDSVCLATLHP--NGHVVCSYAPLMSD-GKQYYIYVSEVAEHFAGLKNNPHNVEVMFLEDESKAKSAILRKRLRYKTNTRFIERGAEFDKAFDSFIEKTGGAGGIKTIRAMQDFHLIALDFKEGRFVKGFGQAYDILGDKIAYV-------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94614 for 1010 contacts (-93.7/contact) +
2D Compatibility (PS) -16097 + (NN) -8219 + (LL) 6568
1D Compatibility (HY) -7200 + (ID) 1300
Total energy: -120862.0 ( -119.67 by residue)
QMean score : 0.329
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