Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLLDIKNLSVRFGDTTAVPVVDGLDLSVDKGEVLAIVGESGSGKSVTMMALMGLIDAP--GWVSADHLRFDGHDMLTLKGRQRRRIVGKDMAMVFQDPMTALNPSYTVGYQIEE--VLRLHLGLRGKALRQRALELLERVEIPAAASRLDAYPHQLSGGMSQRVAIAMAIAAEPKLLIADEPTTALDVTIQAQIMELLLNLQRDQDMALILITHDLAVVAETAQRVCVMYAGEAVEIGGVPALFDRPTHPYTEALIKAIPEHCAGEARLATLPGIVPGRYDRPRGCLLSPRCPYAQEHCRQERPALETHERGAVRCFYPLNLLNEVA |
1L2T Chain:A ((23-222)) | -----------------------NVNLNIKEGEFVSIMGPSGSGKS-TMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKI-----GFVFQ--QFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEERFA--NHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDIN-VARFGERIIYLKDGE---------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137972 for 1543 contacts (-89.4/contact) +
2D Compatibility (PS) -21823 + (NN) -12293 + (LL) 7808
1D Compatibility (HY) -14400 + (ID) 3650
Total energy: -182330.0 ( -118.17 by residue)
QMean score : 0.522
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