Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANTPSAKKRAKQAEKRRSHNASLRSMVRTYIKNVVKAIDAKDLEKAQAAFTAAVPVIDRMADKGIIHKNKAARHKSRLSGHIKALSTAAA
2UXC Chain:T ((11-96))
-----SALKRHRQSLKRRLRNKAKKSAIKTLSKKAVQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEAAG
General information:
TITO was launched using:
RESULT:
Template:
2UXC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26800 for 563 contacts (-47.6/contact) +
2D Compatibility (PS) -9374 + (NN) -4662 + (LL) 184
1D Compatibility (HY) -400 + (ID) 1600
Total energy: -42652.0 ( -75.76 by residue)
QMean score : 0.746
(partial model without unconserved sides chains):
PDB file :
Tito_2UXC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UXC-query.scw
PDB file :
Tito_Scwrl_2UXC.pdb
: