Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTMRGWILAGLLLAALAAQAGEVHGVEVEARLRDYFFDAARRGDQAMLKEFVEAGFDLDVQDAKGYTALILAAYHGHGGAVEQLLEAGADPCVQDARGNTALMGAIFKGEVRIARRLIGAQCSPDQRNGAGQTAAMYAALFKREELLQALSARGADLGARDALGNSVESLRRGELNGTAAAR
1SVX Chain:A ((18-148))
------------------------------------LLEAARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKT----------------
General information:
TITO was launched using:
RESULT:
Template:
1SVX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55455 for 1103 contacts (-50.3/contact) +
2D Compatibility (PS) -15234 + (NN) -15522 + (LL) 4708
1D Compatibility (HY) -5200 + (ID) 2150
Total energy: -88853.0 ( -80.56 by residue)
QMean score : 0.721
(partial model without unconserved sides chains):
PDB file :
Tito_1SVX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SVX-query.scw
PDB file :
Tito_Scwrl_1SVX.pdb
: