Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGLPMNLIWFRCDLRTTDNSALLAAADGRPCLALYLLSPAQWREHDDAPCKVD-FWLRN-LGELQRQLAALNIPLLVRDCGHWRQAPEVIGRL--CRELGVGAVHVNQEYGVNEERRDQAVGQRLREQGVAFHSHLDQLFFAPGSVLTRTGGYFQVFSQFRKVCHERLYQALPGVRPRPQPQPPHALASDPLPDAVP---AFPRPADS-----LRRLWPAGEEVAQERLRDFADQHLADYHERRDFPALPGTSQLSPYLAAGVLSPRQCLDAALV-----ANRGEFSGGQQGAATWINELLWREFYKHILVGYPRVSRHRPFREETEALRWRQAPAELEAWQQGRTGIPIIDAAMRQLLATGWMHNRLRMVVAMFLSKNLLIDWREGERWFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRLFNPLSQSERFDPRGEFIRHWLPELAGLERKAIHDP--------SSLGLFAGVDYPRPMVDLKASRERALAAFRNLPPRDGRA |
| 1U3D Chain:A ((15-491)) | -------IVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEE--EGHYHPGRVSRWWLKNSLAQLDSSLRSLGTCLITK-----RSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQGIAVRSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYD------PESPLLPPKKIISGDVSKCVADPLVFEDDSEKGSNALLARAWSPGWSNGDKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRIKQVAWANEGN-EAGEESVNLFLKSIGLREYSRYISFNHP-YSHERPLLGHLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFDPNGEYVRRWLPELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARLHEALSQM------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152751 for 3713 contacts (-41.1/contact) +
2D Compatibility (PS) -48497 + (NN) -26754 + (LL) 732
1D Compatibility (HY) -30400 + (ID) 7500
Total energy: -265170.0 ( -71.42 by residue)
QMean score : 0.435
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