Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEKLFQLKAHNTTVRTEILAGITTFLTMAYILFVNPSILGETGMDKGAVFVATCLAAAIGSTIMGLIANYPIALAPGMGLNAFFTYTVVLHMGHSWQVALGAVFISATMFFLLSIFRIREWIINSIPLPLRSAIAAGIGLFLALIALQNAGIVVDNPATLIGMGDLTKPAPILATLGFILIVALEARSVTGAVLIGILVVTAIAILLGVTQFGGVVSMPP-------SLAPTFLQLDIKGALDIGLVSVIFAFLFVDLFDNSGTLIGVAKRAGLMGKDGHMPKMGRALIADSTAAMGGSLLGTSTTTSYIESAAGVSAGGRTGLTAIVVAILFLLALFFAPLAGSVPAFATAPALLFVAVLMASGLAEIDWEDITVAAPVVVTALAMPFTYSIATGIAFGFISWTAIKVLSGRWRELNPALVILS------VLFVIKLGFFNA------------------------------------------------------------------ |
| 5DA0 Chain:A ((14-484)) | -------QREWFANPRKDVLAGIVVALALIPEAIAFSIIAG-------VDPQVGLYASFIIALITAFLGGRPGMISAATGAMALLMTGLVKDHGI--QYLFAATVLTGVLQVVFGWAKLARYLKF----VPRSVMVGFVNALAILIFMAQLPQFVGANWQMYAMVAAGLAIIYLLPLVF----KAMPSALVAIVVLTVVAVVTGADVKTVGDMGTLPTALPHFQFPQVPLTFETLAIIFPVALTLSLVGLLESLLTAQLIDERTD----------TTSDKNVESRGQGVANIVTGFFGG-MAGCA---MIGQSMINVTSGGR-GRLSTFVAGAFLMVLILAL----QPLLVQIPMAALVAVMMVVAISTFDWGSLRFPKGETVVMLATVAVTVFTHDLSLGVLIGVVLSALFFARKVSQLSQVTPVDEVDGTRTYRVRGQLFFVSTHDFLHQFDFTHPARRVVIDLSDAHFWDGSAVGALDKVMLKFMRQGTSVELRGLNAASATLVERL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5DA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -363831 for 3407 contacts (-106.8/contact) +
2D Compatibility (PS) -40281 + (NN) -10226 + (LL) 3260
1D Compatibility (HY) -16800 + (ID) 3750
Total energy: -431628.0 ( -126.69 by residue)
QMean score : 0.285
|
|
|