Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRGRKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALN-RPFAINGNLAVAWRREEGEEGWRAWIPWPRFSAEDITLGNPEWTAGKTKASEFASLERIEFRLAPLPLLWQTIRIPQIKLTQPRAELLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRLEVLVDPLGKPVPFGQLAG--KALATGDAANAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQDASKPFPLQAEVS-------AGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTG-ITLPDTPAYSTDGHLLARLKEEGGALFRYENFNGKVGASDLHGSLTFVARQPRPKLSGKLTSEQLRFADLGPL-----IGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIVHSDQLPISDLYTHLVLNDGLLRLEPLRFGVAGGKLESDIRLDGGKQPMQSR-VKMSARGFKLKQLFPGFAPMQTSFGELNGDASLSGSGNSVAKILGGADGELKMLINDGAISKGLTEIAGLNVGNYLVTKLFGDDEVKINCAAADFGLQKGLMTSRLFVFDTENALVNVDGTVNFANEKLDLDVTPHSKGLRIFSLRSPLYVRGTFAKPDAGVHAGPLVARGAGMIALGVTVGPAASLLALVAPSKSDDNQCTALLQRMRLPAKVPAGKR-- |
| 4CCZ Chain:A ((4-638)) | ------------------------------------TLRDEINAILQKRIMVLDGGMGTMIQREKLEEHFRG----QEFKDHARPLKGNNDILSITQPDVIYQIHKEYLL----ADIIETNTFSSTSIAQADYGLEHLAY-RMNMCSAGVARKAAEEVTLQTGIKR--FVAGALGPTNKTLSVSPSV-ERPDYRNITFDELVEAYQEQAKGLLDGGVDILLIETIFDTANAKAALFALQN--LFEEKYAPRPIFISGTIVDKSGRTLSGQTGEGFVISVSHGEPL-CIGLNCALGAAEMRPFIEIIGKCTTAYVLCYPNAGFAMDGLVNIVGGCCGSTPDHIREIAEAVKNCKPRVP--PATAFEGHMLLSGLEPFRIGPYTNFVNIGERCNVAGSRKFAKLIMAGN--------YEEALCVAKVQVEM-GAQVLDVN------------MDDGMLD-GPSAMTRFCNLIASEPDIAKVPLCIDSSNFAVIEAGLKCCQ---GKC-IVNSISLKEGEDDFLEKARKIKKY--GAAMVVMAFDEEGQATETDTKIRVCTRAYHLLVKKLGFNPNDIIFDPNILTIGTGMEEHNLYAINFIHATKVIKETLPGA--RI-------SGGLSNLSFSF----RGMEAIREAMHGVFLYHAIKSGM-DMGIV--NAGNLPVYDDIHKELLQLCEDLIWNKDPEATEKLLRYAQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 132104 for 5354 contacts (24.7/contact) +
2D Compatibility (PS) -59398 + (NN) 10645 + (LL) 7200
1D Compatibility (HY) -22800 + (ID) 5600
Total energy: 62151.0 ( 11.61 by residue)
QMean score : 0.082
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