Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIRRKTAVPRNAGAVLPMLACLAAQAAEGGFLEDAKTDLVLRNYYFNRDFRDHDAGKSLVDEWAQGFILKFSSGYTPGTVGVGLDAIGLFGVKLNSGRGTSNSEL---LPLHDDGRAADNYGRVGVAAKLRVSASELKIGEMLPDIPLLRYDDGRLLPQTFRGFAVVSRELPGLALQAGRFDAVSLRNSADMQDLS-----AWSAPTQKSDGFNYAGAEYRFNRERTQLGLWHGQLEDVYRQSYANLLHKQRVGDWTLGANLGLFVDRDDG-----AARA---------------GEIDSHTVYGLFSAGIGLHTFYLGLQKVGGDSGWQSVYGSSGRS----MGNDMFNGNFTNADERSWQVRYDYDFVGLGWPGLIGMVRYGHGSNATTKAGSGGKEWERDVELGYTVQSGPLARLNVRLNHASNRRSFNSDFDQTRLVVSYPLSW |
| 4FRX Chain:A ((8-434)) | ------------------------------GFIEDSKASLTLRNFYINTDNR------SKQEEWGQGFILNYQSGFTQGTVGFGVDALGLLGVRL-----------GTVFPLESNGEPVHDFASLGLTAKAKVSNTEFRYGTLQPKLPVVTYNDGRLLPVTFEGGQVTSTDLKDFTLVAGQLEHSKGRNSTDNRSLSIAGANGSSASSRDSNKFYYAGGDYKVNKDLT-LQYYYGNLDDFYKQHFLGLIHNWQIGPGVLKTDLRAFDSSSDGKNGSRSGRADGYVSSGYYGSGVTKGEVDNRAFSGLFTYTVSGHSIGAGYQILNGDSDFPFLNRGDGEGSTAYLITDVQIGKFQRAGERTWQVRYGYDFATVGVPGLTFNTIYLSGDKIKTARGD-QSEWERDISLAYVIPDGTFKGLGFTWKNASFRSG---DQDENRLIVSYTL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FRX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19937 for 2743 contacts (-7.3/contact) +
2D Compatibility (PS) -37832 + (NN) -5088 + (LL) 2612
1D Compatibility (HY) -28000 + (ID) 7550
Total energy: -95795.0 ( -34.92 by residue)
QMean score : 0.310
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