Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTLHVDLGERSYPIYIGENLLGDARWFAPHIVGRRVAVISNETVAPLYLETLLKALQGHEVT--PVVLPDGEAYKQWETLQLIFDVL----LKERHDRKTTLIALGGGVIGDMAGFAAACYQRGVNFIQVPTTLLSQVDSSVGGKTGINHPLGKNMIGAFYQPQAVVIDTASLKTLPSRELSAGLAEVIKYGFICDEPFITWLEAHMDALLA--LEP-TVVTEAIERSCAAKARVVGADERESGVRATLNLGHTFGHAIETQQGYGVWLHGEAVGAGTVMALEMSHRLGWLSAAERDRGIRLLRRAGLPVVPPAEMTAEDFMEHMAVDK-KVLDGRLRLVLLQGLGNAVVTGDFPREILDATLRTDYRALADQLGDE |
| 4P53 Chain:A ((69-399)) | ---------------------------------ARRLIVI-DATVRSLYGEQLAAYLAGHDVEFHLCVIDAHESAKVMETVFEVVDAMDAFGVPRRH---APVLAMGGGVLTDIVGLAASLYRRATPYVRIPTTLIGMIDAGIGAKTGVNFREHKNRLGTYHPSSLTLIDPGFLATLDARHLRNGLAEILKVALVKDAELFDLLEGHGASLVEQRMQPG-AALTVLRRAVQGMLEELQPNLWEHQLRRLVDFGHSFSPSVE-MAALPELLHGEAVCIDMALSSVLAHHRGLLTEAELGRVLDVMRLLHLPVLHP--VCTPDLMRAALADTVKHRDGWQHMPLPRGIGDAVFVNDVTQREIEAALLT------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P53.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226329 for 2733 contacts (-82.8/contact) +
2D Compatibility (PS) -34339 + (NN) -16059 + (LL) 3328
1D Compatibility (HY) -24400 + (ID) 5150
Total energy: -302949.0 ( -110.85 by residue)
QMean score : 0.518
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