Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNLILVGPMGAGKSTIGRLLAKELHLAFKDSDKEIEQRCGANIPWIFDVEGEVGFREREQAMLTELCAADGMVIATGGGAVMRDGNRQVLRAGGRVVYLHASVEHQIARTARDRNRPLLQKPNPGQILRDLMALRDPLYREIADVVVETDERPPRLVVQEILERLRKLPPR
1ZYU Chain:A ((6-169))
----VLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEEDVVRAALADHDGVLSLGGGAVTSPGVRAAL-AGHTVVYLEISAAEGVRRTGGNTVRPLLAGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVP---
General information:
TITO was launched using:
RESULT:
Template:
1ZYU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83289 for 1285 contacts (-64.8/contact) +
2D Compatibility (PS) -18037 + (NN) -8609 + (LL) 416
1D Compatibility (HY) -9600 + (ID) 3700
Total energy: -122819.0 ( -95.58 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_1ZYU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZYU-query.scw
PDB file :
Tito_Scwrl_1ZYU.pdb
: