Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPPVVIYTTAWCPYCIRAKQLLQRKGVDFQEIACD---GKPELRAELARKAGSTTVPQIWIGETHVGGCDDLHALERAGKLDALLSA
2HT9 Chain:A ((51-128))
---VVIFSKTSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFVNGTFIGGATDTHRLHKEGKL------
General information:
TITO was launched using:
RESULT:
Template:
2HT9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54783 for 515 contacts (-106.4/contact) +
2D Compatibility (PS) -8316 + (NN) -3183 + (LL) 464
1D Compatibility (HY) -7200 + (ID) 1300
Total energy: -74318.0 ( -144.31 by residue)
QMean score : 0.826
(partial model without unconserved sides chains):
PDB file :
Tito_2HT9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HT9-query.scw
PDB file :
Tito_Scwrl_2HT9.pdb
: