Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METVVGLTAIAVALLIGLGALGTAIGFGLLGGKFLEGAARQPEMVPMLQVKMFIVAGLLDAVTMIGVGIALFFTFANPFVGQIAG
3ZK2 Chain:A ((10-88))
---VLGCSAVGAGLAM-IAGLGPGIGEGYAAGKAVESVARQPEARGSIISTMILGQAVAESTGIYSLVIALILLYANPFLSKL--
General information:
TITO was launched using:
RESULT:
Template:
3ZK2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48155 for 463 contacts (-104.0/contact) +
2D Compatibility (PS) -8184 + (NN) -3691 + (LL) 164
1D Compatibility (HY) -6000 + (ID) 1250
Total energy: -67116.0 ( -144.96 by residue)
QMean score : 0.250
(partial model without unconserved sides chains):
PDB file :
Tito_3ZK2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZK2-query.scw
PDB file :
Tito_Scwrl_3ZK2.pdb
: