Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRARAVLRAMTVAALSAADRCL
3F1B Chain:A ((9-197))
-------------------RLPRAVREQQMLDAAVDVFSDRGFHETSMDAIAAKAEISKPMLYLYYGSKDELFAACIQREGLRFVEALAPAGDPGLSPREQLRRALEGFLGFVGKHRKSWMVLYRQAM--QQAFVGSVQSSRDRLIELTAHLLESSTK----QDFELIAIALVGAGEAVADRVAGG---EIEVDAAADLLESLAWRGLAGK----
General information:
TITO was launched using:
RESULT:
Template:
3F1B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106684 for 1387 contacts (-76.9/contact) +
2D Compatibility (PS) -20121 + (NN) -14763 + (LL) 1008
1D Compatibility (HY) -7200 + (ID) 1700
Total energy: -149460.0 ( -107.76 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_3F1B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F1B-query.scw
PDB file :
Tito_Scwrl_3F1B.pdb
: