Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNNVLVTGGTGFLGMHIIFQLLQQGYQVKTTVRSLKSKEKVIEILQNNGITDFTHLSFVELDLSKDEGWKEAMLDCEYVLSVASPVFFGKFKNEEELISPAIEGITRILQAAKEAK-VKRVVMTSNFGAIGFSNADKNSITTEAYWTDELAKGLS----AYEKSKLIAEKEAWKFMENETELEFATINPVAIFGPSQSNHVSGSFDLLKNLLNGSMKRVINIPLNVVDARDVADLHIRAMITPEANGERFIASADGEISMADIAHLLQRERPELVDKMPKKTLPNAAIRAAALFSKHAKEGELMINMNRQISNSKARDVLGWKPISTKEEAVLAAVDSLAKYGLLD |
| 2P4H Chain:X ((5-326)) | -KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADRDVSFLTNL---PGASEK--LHFFNADLSNPDSFAAAIEGCVGIFHTASPI--------EIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ-NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLENSVPGG-RYNCS-PFIVPIEEMSQLLSAKYPEY--QILTV------------DELKEIKGAR----LPDLNTKKLVD-AGFDFKYTIEDMFDDAIQCCKEKGYL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129550 for 2613 contacts (-49.6/contact) +
2D Compatibility (PS) -33141 + (NN) -15246 + (LL) 3228
1D Compatibility (HY) -16800 + (ID) 4200
Total energy: -195709.0 ( -74.90 by residue)
QMean score : 0.510
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