Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNNVLVTGGTGFLGMHIIFQLLQQGYQVKTTVRSLKSKEKVIEILQNNGITDFTHLSFVELDLSKDEGWKEAMLDCEYVLSVASPVFFGKFKNEEELISPAIEGITRILQAAKEAK-VKRVVMTSNFGAIGFSNADKNS--ITTEAYWT--DELAKGLSAYEKSKLIAEKEAWKFMENETELEFATINPVAIFGPSQSNHVSGSFDLLKNLLNGSMKRVINIPLNVVDARDVADLHIRAMITPEANGERFIASADGEISMADIAHLLQRERPELVDKMPKKTLPNAAIRAAALFSKHAKEGELMINMNRQISNSKARDVLGWKPISTKEEAVLAAVDSLAKYGLLD- |
| 4QTZ Chain:A ((1-321)) | LGNVVCVTGASGYIASWLVRLLLHRGYTVKATVRDPNDPKKVDHLVKLDGAKER--LQLFKANLLEEGAFDSVVQGCHGVFHTASPFYHDVKDPQAELIDPALKGTLNVLNSCAKSPSLKRVVLTSSIAAVAYNGKPRTPDVVVDETWFTDADFCAKSNLWYVVSKTLAEEAAWKFVKEN-NIDMVTINPAMVIGPLLQPVLNTSAAAILNLINGA-QTFPNASFGWVNVKDVANAHILAYENASASGRHCLV--ERVAHYSEVVRILRELYPSL--QLPEKCADDKPYVPI-----------------YQVSKEKAKS-LGL-EYTPLEVSIKETVESLKEKKFANL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QTZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158301 for 2680 contacts (-59.1/contact) +
2D Compatibility (PS) -34358 + (NN) -10940 + (LL) 2256
1D Compatibility (HY) -21600 + (ID) 4450
Total energy: -227393.0 ( -84.85 by residue)
QMean score : 0.461
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