Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSELIVNVINGPNLGRLGRREPAVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPIATGVIVGLGIQGYLLALRYLAEHVGT
3N7A Chain:W ((4-144))
---LIVNVINGPNLGRLGRREPAVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPIATGVIVGLGIQGYLLALRYLAEH---
General information:
TITO was launched using:
RESULT:
Template:
3N7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113966 for 1138 contacts (-100.1/contact) +
2D Compatibility (PS) -15807 + (NN) -6346 + (LL) 356
1D Compatibility (HY) -19600 + (ID) 7050
Total energy: -162413.0 ( -142.72 by residue)
QMean score : 0.668
(partial model without unconserved sides chains):
PDB file :
Tito_3N7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N7A-query.scw
PDB file :
Tito_Scwrl_3N7A.pdb
: