Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEYDQINSYLVDIFNRIMIIEEMSLKTSQFSDVSLKEMHTIEIIGKHSEVTPSDVARELMLTLGTVTTSLNKLEKKGYIERKRSSIDRRVVHLSLTKRGRLLDRLHSKFHKSMVSHIIEDLGEEDIKMLTSALGNLHKFLEDLV
3G3Z Chain:A ((5-137))
-------DQLGTRINLICNVFDKWIG---QQDLNYNLFAVLYTLATEGSRTQKHIGEKWSLPKQTVSGVCKTLAGQGLIEWQEGEQDRRKRLLSLTETGKAYAAPLTESAQEFSDKVFATFGDKRTTRLFADLDALAEVMEKTI
General information:
TITO was launched using:
RESULT:
Template:
3G3Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32945 for 825 contacts (-39.9/contact) +
2D Compatibility (PS) -13864 + (NN) -4046 + (LL) 716
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -55339.0 ( -67.08 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_3G3Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G3Z-query.scw
PDB file :
Tito_Scwrl_3G3Z.pdb
: