Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRARAVLRAMTVAALSAADRCL
3AQT Chain:A ((40-226))
------------------RAQKREQTRARLITSARTLMAERGVDNVGIAEITEGANIGTGTFYNYFPDREQLLQAVAEDAFESVGIALDQVLTKLDDPAEVFAGSLRHLVRHSLEDRIWGGFFIQ-MGAAHPVLMRIL---GPRARRDLLHGLETG--RFTIEDLDLATTCTFGSLIAAIQM--ALS------DDKDQIFAAAMLRMVGVQAA--
General information:
TITO was launched using:
RESULT:
Template:
3AQT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114198 for 1376 contacts (-83.0/contact) +
2D Compatibility (PS) -20130 + (NN) -14374 + (LL) 928
1D Compatibility (HY) -5200 + (ID) 1700
Total energy: -154674.0 ( -112.41 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_3AQT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AQT-query.scw
PDB file :
Tito_Scwrl_3AQT.pdb
: