Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKITISKVLPDFETLVVGLFEDGELVSNGKVLQ--DKQIINSIKKFSHFNGGFGEFFSVTLSD---GKNVIIVGLGKRDEWNENKELSVGGKIYCELGRLKIKQATVSI-----------EGSAENIAYGAFLRSFKFDKYKTKKDEEITEVEEIMVLAKDEQLNDAEKSFEHLRQEGEGIFLARTFITEPPNVLYPESYADCIKSELTKF-GLEIEVLDKKQMEKKKMGALLGVAQGSSKEPKLVVIRWNGASKEQKPIAFVGKGITFDTGGVSLKPSRGMESMKYDMAGSAAVVGVMRTLAGRKARINAVGVVALAENAIDGNAQRPSDVVTSMSGQTIEVLNTDAEGRLVLADALWYTQDRFAPEFMIDLATLTGAIVVALGNNEYAGLFSNNDELANRLVEAGNEANEKLWRFPMNETYDKIIDSPIADVQNIAPTGSGGDSIMAAQFLQRFVNDTCWAHLDIAGTAWHEKGTDISPKGAVGFGVRLLNKLVEKYYETSD |
| 3H8G Chain:F ((12-496)) | ---------SVKTATLVIPVGENRKLGAVAKAVDLASEGAISAVLKRGDLAGKPGQTLLLQNLQGLKAERVLLVGSGKDEALGDRTWRKLVASVAGVLKGLNGADAVLALDDVAVNNRDAHYGKYRLLAETLLDGEYVFDRFKSQKVEPRA-LKKVTLLADKAGQAEVERAVKHASAIATGMAFTRDLGNLPPNLCHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLNYQGGKKADKPFVLVGKGITFDTGGISLKPGAGMDEMKYDMCGAASVFGTLRAVLELQLPVNLVCLLACAENMPSGGATRPGDIVTTMSGQTVEILNTDAEGRLVLCDTLTYAE-RFKPQAVIDIATLTGACIVALGS-HTTGLMGNNDDLVGQLLDAGKRADDRAWQLPLFDEYQEQLDSPFADMGNIGG--PKAGTITAGCFLSRFAKAYNWAHMDIAGTAWISG---GKDKGATGRPVPLLTQYLLDRAGA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H8G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -261490 for 4230 contacts (-61.8/contact) +
2D Compatibility (PS) -50064 + (NN) -22270 + (LL) 824
1D Compatibility (HY) -30000 + (ID) 8750
Total energy: -371750.0 ( -87.88 by residue)
QMean score : 0.524
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