Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKFFNQFFENIGEDKNREGLKETPKRVQELWKFLYKGYKEDPRVALK-SAYFQGVCDEMIVAQNIEFYSTCEHHLLPFFGNISVGYIPKEKIVGISAIAKLIEIYSKRLQIQERLTTQIAETFDEIIEPRGVIVVCEAKHLCMSMQGVQKQNAIIKTSVLRGLFKKDPKTRAEFMQLLKS
1WUR Chain:A ((38-216))
LQALAAEWLQVIGEDPGREGLLKTPERVAKAWAFLTRGYRQRLEEVVGGAVFPA-EGSEMVVVKGVEFYSMCEHHLLPFFGKVHIGYIPDGKILGLSKFARIVDMFARRLQVQERLAVQIAEAIQEVLEPQGVGVVVEGVHLCMMMRGVEKQHSRTVTSAMLGVFRENQKTREEFLSHLR-
General information:
TITO was launched using:
RESULT:
Template:
1WUR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95485 for 1342 contacts (-71.2/contact) +
2D Compatibility (PS) -18857 + (NN) -3231 + (LL) -200
1D Compatibility (HY) -18400 + (ID) 4050
Total energy: -140223.0 ( -104.49 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_1WUR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WUR-query.scw
PDB file :
Tito_Scwrl_1WUR.pdb
: