Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKITISKVLPDFETLVVGLFEDGELVSNGKVLQ--DKQIINSIKKFSHFNGGFGEFFSVTLSD---GKNVIIVGLGKRDEWNENKELSVGGKIYCELGRLKIKQATVSI----------EGSAENIAYGAFLRSFKFDKYKTKKDEEITEVEEIMVLAKD-EQLNDAEKSFEHLRQEGEGIFLARTFITEPPNVLYPESYADCIKSELTKF--GLEIEVLDKKQMEKKKMGALLGVAQGSSKEPKLVVIRWNGASK-EQKPIAFVGKGITFDTGGVSLKPSRGMESMKYDMAGSAAVVGVMRTLAGRKARINAVGVVALAENAIDGNAQRPSDVVTSMSGQTIEVLNTDAEGRLVLADALWYTQDRFAPEFMIDLATLTGAIVVALGNNEYAGLFSNNDELANRLVEAGNEANEKLWRFPMNETYDKIIDSPIADVQNIAPTGSGGDSIMAAQFLQRFVNDTCWAHLDIAGTAWHEKGTDISPKGAVGFGVRLLNKLVEKYYETSD |
| 1GYT Chain:A ((12-499)) | ---------KQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVE-RFEPEAVIDVATLTGACVIALGH-HITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGG--RPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSG----KAKGATGRPVALLAQFLLNRAGFNG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253475 for 4256 contacts (-59.6/contact) +
2D Compatibility (PS) -50424 + (NN) -21804 + (LL) 900
1D Compatibility (HY) -30400 + (ID) 8600
Total energy: -363803.0 ( -85.48 by residue)
QMean score : 0.525
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