Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDIKKIKEILPHRYPFLLVDRVISVEEGKKVTAIKNVTANEEFFNGHFPEYPVMPGVLIVEALAQTSGIAMMQSEANKGKIGLFAGIDGCRFKRQVVPGDQLLLEAEITRMRG--AIAKAKVKATVEGDLVCE-AEIMFALSDLPK
1Z6B Chain:A ((11-153))
-IDIEDIKKILPHRYPFLLVDKVIYMQPNKTIIGLKQVSTNEPFFNGHFPQKQIMPGVLQIEALAQLAGILCLKSD---NNLFLFAGVDGVRWKKPVLPGDTLTMQANLISFKSSLGIAKLSGVGYVNGKVVINISEMTFALS----
General information:
TITO was launched using:
RESULT:
Template:
1Z6B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103294 for 1016 contacts (-101.7/contact) +
2D Compatibility (PS) -14506 + (NN) -771 + (LL) 360
1D Compatibility (HY) -17200 + (ID) 3400
Total energy: -138811.0 ( -136.62 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_1Z6B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z6B-query.scw
PDB file :
Tito_Scwrl_1Z6B.pdb
: