Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHPLLILAFVGAAVAFPSDDDDKIVGGYTCAENSVPYQVSLNAGYHFCGGSLINDQWVVSAAHCYQYHIQVRLGEYNIDVLEGGEQFIDASKIIRHPKYSSWTLDNDILLIKLSTPAVINARVSTLLLPSACASAGTECLISGWGNTLSSGVNYPDLLQCLVAPLLSHADCEASYPGQITNNMICAGFLEGGKDSCQGDSGGPVACNGQLQGIVSWGYGCAQKGKPGVYTKVCNYVDWIQETIAANS
1F0U Chain:A ((21-243))
-----------------------IVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN-
General information:
TITO was launched using:
RESULT:
Template:
1F0U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171444 for 1895 contacts (-90.5/contact) +
2D Compatibility (PS) -24351 + (NN) -9156 + (LL) 1460
1D Compatibility (HY) -26000 + (ID) 8250
Total energy: -237741.0 ( -125.46 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_1F0U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F0U-query.scw
PDB file :
Tito_Scwrl_1F0U.pdb
: