Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDKG-AKKIAILDVDFHHGNGTQDIFYERGDVFFASLH-GDPAEAFPHFLGYAEETGKGAGAGTTANY--------PMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISF--FKLTSPDYITMGRTIAA-SGVPLLVVMEGGYGVPEIGLNVANVLKGVAG |
3ZNR Chain:A ((178-368)) | --------------------------------------------------------------------------------------------------------------------------------------------------KNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS-GAVDEVGAGSGEGFNVNVAWAGGLDPPMG-DPEYLAAFRIVVMPIAR--EFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAI------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ZNR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -88469 for 1471 contacts (-60.1/contact) +
2D Compatibility (PS) -19183 + (NN) -6519 + (LL) 11080
1D Compatibility (HY) -10800 + (ID) 3150
Total energy: -117041.0 ( -79.57 by residue)
QMean score : 0.187
|
|
|