Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNLTSMSGFLLMGFSDERKLQILHALVFLVTYLLALTGNLLIITIITVDRRLHSPMYYFLKHLSLLDLCFISVTVPQSIANSLMGNGYISLVQCILQVFFFIALASSEVAILTVMSYDRYAAICQPLHYETIMDPRACRHAVIAVWIAGGLSGLMHAAINFSIPLCGKRVIHQFFCDVPQMLKL----ACSYEFINEIALAAFTTSAAF-ICLISIVLSYIRIF----STVLRIPSAEGRTKVFSTCLPHLFVATFFLSAAGFEFLRLP---------SDSSSTVDLVFSVFYTV--IPPTLNPVIYSLRNDSMKAALRKMLSKEELPQRKMCLKAMFKL |
| 2YCZ Chain:A ((9-299)) | ---------------QWEAGMSLLMALVVL----LIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWA-------ISALVSF-LPI----MMHWWRDEDPQALKCYQDPGCC-DFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVM-LMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225379 for 1900 contacts (-118.6/contact) +
2D Compatibility (PS) -28176 + (NN) -9869 + (LL) 3660
1D Compatibility (HY) -25600 + (ID) 3500
Total energy: -288864.0 ( -152.03 by residue)
QMean score : 0.268
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