Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIINTSYVEITTFFLVGMPGLEYAHIWISIPICSMYLIAILGNGTILFIIKTEPSLHGPMYYFLSMLAMSDLGLSLSSLPTVLSIFLFNAPETSSSACFAQEFFIHGFSVLESSV---LLIMSFDRFLAIHNPLRYTSILTTVRVAQIGIVFSFKSMLLVLPFPFTLRSL--------------RYCKKNQLSHSYCLHQDVMKLACSDNRIDVIYGFFGALCLMVDFILIAVSYTLIL------------KTVPGIASKKEELKALNTCVSHICAVIIFYLPIINLAVVHRFA------GHVSPLINVLMANVLLLVPPLMKPIVYCVKTKQIRVRVVAKLCQWKI |
| 4UHR Chain:A ((15-296)) | ----------------------------------AIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIAI-----STGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAK--GII----AICWVLSFAIGLTPMLGWNNCGQPKEGKA-GCGEGQVA---CLFEDVVPM-----NYMVYFNFFA--CVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-H-APLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212399 for 1850 contacts (-114.8/contact) +
2D Compatibility (PS) -24945 + (NN) -8969 + (LL) 4696
1D Compatibility (HY) -28000 + (ID) 3400
Total energy: -273017.0 ( -147.58 by residue)
QMean score : 0.305
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