Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLGSLGNSSSSVSATFLLSGIPGLERMHIWISIPLCFMYLVSIPGNCTILFIIKTERSLHEPMYLFLSMLALIDLGLSLCTLPTVLGIFWVGAREISHDACFAQLFFIHCFSFLESSVLLSMAFDRFVAICHPLHYVSILTNTVIGRIGLVSLGRSVALIFPLPFMLKRFPYCGSPVLSHSYCLHQEVMKLACA-------DMKANSIYGMFVIVSTVGIDSLLILFSYALILRTVLSIASRAERFKALNTCVSHIC--------AVLLFYTPMIGLSVIHRFGKQAPHLVQVVMGF--MYLLFPPVMNPIVYSVKTKQIRDRVTHAFCY
3CAP Chain:A ((49-322))----------------------------------------MLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAI-------MGVAFTWVMALA--------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVA-FYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCC


General information:
TITO was launched using:
RESULT:

Template: 3CAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -225292 for 1878 contacts (-120.0/contact) +
2D Compatibility (PS) -25330 + (NN) 3153 + (LL) 3736
1D Compatibility (HY) -22400 + (ID) 2800
Total energy: -268933.0 ( -143.20 by residue)
QMean score : 0.232

(partial model without unconserved sides chains):
PDB file : Tito_3CAP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CAP-query.scw
PDB file : Tito_Scwrl_3CAP.pdb: