Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEETNNSSEKGFLLLGFSDQPQL---ERFLFAIIL-YFYVLSLLG---NTALILVCCLDSRLHTPMYFFLSNLSCVDICFTTSVAPQLLVTMNKKDKTMSYGGCVAQLYVAMGLGSSECILLAVMAYDRYAAVCRPLRYI------AIMHPRF-------CASLAGGAWLSGLITSLIQCSLTVQLPLCGHRTLDHIFCEVPVLIKLACVDTTFNEAELFVASVVFLIVPVLLILVSYGFITQAVLRIKSAAGRQKAFGTCS------SHLVVVIIFYGTIIFM-YLQPANRRSKNQG-KFVSLFYTI------VTPLLNPIIYTLRNKDVKGALRTLILGSAAGQSHKD |
| 2G87 Chain:A ((28-320)) | ------------------EAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGW-SRYIPEGMQCS-------CG---IDYYTPH----------EETNNESFVIYMFVVHFIIPLIVIFFCYG---QLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2G87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -194901 for 1893 contacts (-103.0/contact) +
2D Compatibility (PS) -26136 + (NN) -4326 + (LL) 3608
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -227105.0 ( -119.97 by residue)
QMean score : 0.163
|
|
|