Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNQSSPMGFLLLGFSEHPALERTLFVVVFTSYLLTLVG---NTLIILLSVLYPRLHSPMYFFLSDLSFLDL-----CFTTSCVPQML-VNLWGPKKTISFLGCSVQLFIFLSLGTTECILLTVMAFDRYVAVCQPLHYATIIHPRLCWQLASVAWVMSLVQSIVQTPSTLHLPFCPHQQIDDFLCEVPSLIRLSCGDTSY-------NEIQLAVSSVIFVVVPLSLILASYGATAQAVLRINSATAWRKAFGTCSSHLTVVTLFYSSVIAVYLQPKNPYA-------QGRGKFFG-------LFYAVGTPSLNPLVYTLRNKEIKRAL-------RRLLGKERDSRESWRAA |
| 3C9M Chain:A ((45-327)) | --------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPT------GCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVA-FTWVMALA--------------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYG---QLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSCFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNP-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216485 for 2080 contacts (-104.1/contact) +
2D Compatibility (PS) -24877 + (NN) 3093 + (LL) 5228
1D Compatibility (HY) -24000 + (ID) 3500
Total energy: -260541.0 ( -125.26 by residue)
QMean score : 0.218
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