Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNITLYSFLYVLRLNEGNSTGRNIDERKKMQGENFTIWSIFFLEGFSQYPGLEVVLFVFSLVMYLTTLLG---NSTLILITILDSRLKTPMYLFLGNLSFMDICYTSASVPTLLVNLLSSQKTIIFSGCAVQMYLSLAMGSTECVLLAVMAYDRYVAICNPL-RYSIIMNRCVCARMATVSWVTGCLTALLETSFALQIP---LCGNLIDHFTCEILAVLKLACTSSLLMNTIMLVVSILLLPIPMLLVCISYIFILSTILRITSAEGRNKAFSTCGAHLTVVIL------------YYGAALSMYLKPSSSNAQKIDKIISLLYGVLTPMLNPIIYSLRNKEVKDAMKKLLGKITLHQTHEHL
2PED Chain:A ((47-318))--------------------------------------------------------------MFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL-VGWSRYIPEGMQCSCGIDYYTPH-------EETNNESFVIYMFVVHFI---IPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTH-QGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEA


General information:
TITO was launched using:
RESULT:

Template: 2PED.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -207881 for 1921 contacts (-108.2/contact) +
2D Compatibility (PS) -25031 + (NN) 1290 + (LL) 5992
1D Compatibility (HY) 1200 + (ID) 850
Total energy: -225280.0 ( -117.27 by residue)
QMean score : 0.219

(partial model without unconserved sides chains):
PDB file : Tito_2PED.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PED-query.scw
PDB file : Tito_Scwrl_2PED.pdb: