Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEEAILLNQTSLVTYFRLRGLSVNHKARIAMFSMFLIF-YVLTLIG---NVLIVITIIYDHRLHTPMYFFLSNLSFIDVCHSTVTVPKMLRDVWSEEKLISFDACVTQMFFLHLFACTEIFLLTVMAYDRYVAICKPLQYMIVMNWKVCVLLAVALWTGGTIHSIALTSLTIKLP-YCGPDEIDNFFCDVPQVIKLAC-ID--TP--------YVLEILIVSNSGLISVVCFVVLVVSYAVILVSLRQQISKGKWKALSTCAAHLTVVTL--------FLGHCIFIYSRPSTSL-PEDKAVSVFFTAVTPLLNPIIYTLRNEEMKSALNKLVGRKERKEEK |
| 1LN6 Chain:A ((40-315)) | ----------------------------------LAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS-----NFRF-----------GENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVVATTLCCGKNPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210523 for 1934 contacts (-108.9/contact) +
2D Compatibility (PS) -23271 + (NN) 16832 + (LL) 5704
1D Compatibility (HY) -22400 + (ID) 2850
Total energy: -236508.0 ( -122.29 by residue)
QMean score : 0.126
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