Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METQNLTVVTEFILLGLTQSQDAQLLVFVLVLIFYLIILPGNFLIIFTIKSDPGLTAPLYFFLGNLALLDASYSFIVVPRMLVDFLSEKKVISYRSCITQLFFLHFLGAGEMFLLVVMAFDRYIAICRPLHYSTIMNPRACYALSLVLWLGGFIHSIVQVALILHLPF-CGPNQLDNFFCDVPQVIKLACTNTFVVELLMVSNSG--------------LLSLLCFLGLLASYAVILCRIREHSSEGKSKAISTCTTHIIIIFLMF--------GPAIFIYTCPFQAF-PADKVVSLFHTVIFPLMNPVIYTLRNQEVKASMRKLLSQHMFC |
2I35 Chain:A ((36-317)) | --------------------QFSMLAAYMFLLI--MLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS-----NFRF-----------GENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLV--FTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKND |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2I35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -248316 for 2040 contacts (-121.7/contact) +
2D Compatibility (PS) -25916 + (NN) -3559 + (LL) 4020
1D Compatibility (HY) -20800 + (ID) 3400
Total energy: -297971.0 ( -146.06 by residue)
QMean score : 0.308
|
|
|