Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METGNQTHAQEFLLLGFSATSEIQFILFGLFLSMYLVTF---TGNLLIILAICSDSHLHTPMYFFLSNLSFADLCFTSTTVPKMLLNILTQNKFITYAGCLSQIFFFTSFGCLDNLLLT-------VMAYDRFVAVCHPLHYTVIMNPQLCGLLVLGSWCISVMGSLLETLTVLRLSFCTEMEIPHFFCDL-LEVLKL----ACSDTFINNVVIYFATGVLG--VISFTGIFFS---YYKIVFSILRISSAG------RKHKAFSTCGSHLSVVTLFYGTGFGVYLSSAATPSSRTSLVASVMYTM------VTPMLNPFIYSLRNTDMKRALGRLLSRATFFNGDITAGLS |
| 2Y01 Chain:A ((13-300)) | ----------------------------GMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP-------FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMM-------------HWWRDEDPQALKCYQDPGCCD-FVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ--------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFN----RDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152530 for 1643 contacts (-92.8/contact) +
2D Compatibility (PS) -24141 + (NN) -2634 + (LL) 6128
1D Compatibility (HY) -25200 + (ID) 3750
Total energy: -202127.0 ( -123.02 by residue)
QMean score : 0.147
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