Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERGNQTEVGNFLLLGFAEDSDMQLLLHGLFLSMYLVTII---GNLLIILTISSDSHLHTPMYFFLSNLSFADICFTSTTVPKMLVNIQTQSKMITFAGCLTQIFFFIAFGCLDNLLLTMT-------AYDRFVAICYPLHYTVIMNPRLCGLLVLGSWCISVMGSLLETLTILRLSFCTNMEIPHFFC--DPSEVLKLACSDTFINN--------IVMYFVTIVLGVFPLCGILFSYSQIFSSVLRVSARG-------QHKAFSTCGSHLSVVSLFYGTGLGVYLSSAVTPPSRTSLAASVMYTM------VTPMLNPFIYSLRNKDMKGSLGRLLLRATSLKEGTIAKLS |
| 2Y01 Chain:A ((8-299)) | -----------------------QQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP-------FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIM----MHWWRDEDPQALKCYQDP------GCCD-FVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ-----------SRVMLMREHKALKTLGIIMGVFTLCW---LPFFLVNIVNVFNR-DLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175366 for 1662 contacts (-105.5/contact) +
2D Compatibility (PS) -24083 + (NN) -773 + (LL) 5396
1D Compatibility (HY) -27600 + (ID) 3450
Total energy: -225876.0 ( -135.91 by residue)
QMean score : 0.126
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