Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINSTSTQPPDESCSQNLLITQQIIPVLYCMVFIAGILLNG-VSGWIFFYVPSSKSFIIYLKNIVIADFVMSLTFPFKILGDSGLGPWQLNVFVCRVSAVLFYVNMYVSIVFFGLISFDRYYKIVKPLWTSFIQSVSYSKLLSVIVWMLMLLLAVPNIILTNQSVREVTQIKCIELKSELGRKWHKASNY-IFVAIFWIVFLLLIVFY-TAITKKIFKSHLKSSRNSTSVKKKSSRNIFSIVFVFFVCFVPYHIARIPYTKSQTEAHYSCQSKEILRYMKEFTLLLSAANVCLDPIIYFFLCQPFREI---LCKKLHIPLKAQNDLDISRIKRGNTTLESTDTL |
| 4RWD Chain:A ((125-406)) | ------------------------ITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQS-AKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSP-SWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDID-----RRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231658 for 2108 contacts (-109.9/contact) +
2D Compatibility (PS) -27405 + (NN) -1254 + (LL) 3812
1D Compatibility (HY) -23200 + (ID) 3350
Total energy: -283055.0 ( -134.28 by residue)
QMean score : 0.195
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