Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSMNNSKQLVSPAAALLSNTTCQTENRLSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAIAVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKITSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCF--YNTEDIKDWEDRFYLLLFSFLGLLALGVSLLCNAITGITLLRVKFKSQQHRQGRSHHLEMVIQLLAIMCVSCICWSPFLVTMANIGINGNHSLETCETTLFALRMATWNQILDPWVYILLRKAVLKNLYKLASQCCGVHVISLHIWELSSIKNSLKVAAISESPVAEKSAST |
1L9H Chain:A ((67-325)) | -------------------------------------------------------QHKKLRTPLNYILL--NLAVADLF--MVFGGFTTTLYTSLHGYFVFGPTG--CNLEGFFATLGGEIALWSLVVLAIERYVVVCKPM-SNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAA-----ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKT-SAVYNPVIYIMMNKQFRNCM--VTTLCCGKNPLGDSTTVSKTETSQVAPA-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191762 for 1958 contacts (-97.9/contact) +
2D Compatibility (PS) -25621 + (NN) -4495 + (LL) 7340
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -218588.0 ( -111.64 by residue)
QMean score : 0.263
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