Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASRYVAVGMI-LSQTVVGVLGSFSVLLHYLSFYCTGCRL-RSTDLIVKHLIVANFLALRCKGVPQTMAAF-GVRYFLNALGCKLVFYLHRVGRGVSIGTTCLLSV--FQVITVSSRKSRWAKLKEKAPKHVGFSVLLCWIVCMLVNIIFPMYVTGKWNYTNITVNEDLGYCSGGGNNKIAQTLRAMLLSFPD-VLCLGLMLWVSSSMVCILHRHKQRVQHIDR----------------------------------------------------------------------------------------------------------------------------------------------------SDLSPRASPENRATQSILILVSTFVSSYTLSCLFQVCMALLDN-PNSLLVNTSALMSVCFPTLSPFVLMSCDPSVYRFCFAWKR |
| 2RH1 Chain:A ((43-476)) | -------MGIVMSLIVLAIVFGNVLVITA----IAKFERLQTVTNYFITSLACADLVMGLAV-VPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAIT-SPFKYQ----SLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFT----NQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLC |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166288 for 2094 contacts (-79.4/contact) +
2D Compatibility (PS) -28211 + (NN) -7581 + (LL) 2088
1D Compatibility (HY) -16400 + (ID) 2250
Total energy: -218642.0 ( -104.41 by residue)
QMean score : ?
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