Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITLNNLNCCTKFGIELEFYTEGIEREHLFLNSVKNKIALLGF---SCKKESSTHQYEIKSGCYNDSNNLIKHFDLAKELLTETAQKLGGNTSFKAKPYLDRAGSALNVHVNLVDSNNSNLFYCNEQK----YSDYLIYGIGGLCAMMKEHMSFFAPSDDSYLRFQYPDIHTPTTISWGVNNRTAAIRIPCLGSKC-RLEHRVPGADCNLEKVLIAIIEGITFGIENKIAPPNRVYGIASDPQYKMENLV |
| 5DM3 Chain:A ((203-404)) | -------------------------KEEHVLRPLRNHLHAAGIPVEGTKGE---GQEELNIRCAKALDTADYH-TIAKHATKEIAWQQGRAVTFLSKWHHAHAGSSSHIHQSLW---KQGLPAFHDERDALGMSALMKHYLAGLLKYAPDYTYFLAPYLNSYKRFQ------PTRTVWSVDNRTAGFRLCAEGTRAVRIECRIGGSDLNPYLAMAGQLAAGIKGIEECLALPPPAGLIPQNLRDAMEALR |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86572 for 1337 contacts (-64.8/contact) +
2D Compatibility (PS) -19338 + (NN) -6234 + (LL) 1988
1D Compatibility (HY) -1600 + (ID) 2750
Total energy: -114506.0 ( -85.64 by residue)
QMean score : 0.342
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