Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGSKSAFNSLDPALLYKGDLLRRMLFTLIALICYRLGTYVPIPGINLDIINDIFPKEGAGIFGVFNLFSGGALARMTILVLNVMPYIVASIVMQLLSSAVKGINEVKNDGELGRRRMNSYIRYMTIVFCIFQSVTILIGLERMNREGTLVVIEPGVMFRTVGIFSLLGGTMFLIWLGEQISASGIGNGISLIIFTGIISELHNAFSFLLTLNKNGSMSLLIILFVFVLFFLLLLLIIFVESSYRKVTVQYPKKQFKRLHS-DDFTYIPLKINLSGVIPTIFANAILLTPVSIANFYKGHAFSDFILNYFMANKVVYIAAYLALIVFFNFFYTNFIFNPEENADFLKKNGGFIPGRRPGKHTSDYLQDIVFKLTFIGSAYLVVICTVPEVMRYYYDMPFIFGGTSLLIIVNVTTDTIMQIQSYIFSNRYDSWIKKYESKTKKLR |
3DIN Chain:C ((8-423)) | -------------AFKIPELRDRIIFTFLALIVFRMGIYIPVPGLN---------------LSFYDVFTGGALSRFSVFTMSVTPYITASIILQLLASVMPSLKEMLREGEEGRKKFAKYTRRLTLLIGGFQAFFVSFSLARSNPDMVA-PGVNVLQFTVLSTMSMLAGTMFLLWLGERITEKGIGNGISILIFAGIVARYPSYIRQAYLGG----LNLLEWIFLIAVALITIFGIILVQQAERRITIQYARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNN----ETLKNLFRAGGFLYLLIYGLLVFFFTYFYSVVIFDPREISENIRKYGGYIPGLRPGRSTEQYLHRVLNRVTFIGAVFLVVIALLPYLVQGAIKVNVWIGGTSALIAVGVALDIIQQMETHMVMRHYEGFIK---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DIN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -284034 for 2732 contacts (-104.0/contact) +
2D Compatibility (PS) -39441 + (NN) 8390 + (LL) 2056
1D Compatibility (HY) -44000 + (ID) 7250
Total energy: -364279.0 ( -133.34 by residue)
QMean score : 0.197
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