Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNYIQNSGTRVIRDELQATGKVRENEDQPVENIKITNDHAFYKLICEKLVQGDFSVEQFNLLHYDISEKMIEKPFTIKEINDFCEKNDIPLFTVNELLTLVPKDDIKCYVDYETDSVRNHDHGYIADQINIKASYIKADLVNHQSYQDYITDSDTYYGFIYKKLIVSDALEKLERGETEAQIRESLGNINRKEIKELLEKVPQGSLKEWLSDPANKGYTDVEYHVLYEKISEELVHTSMSINRIKEIYDKYGIVPPTESEFESLKKVQGEKRSIEYHEQKTGLTFQGRINLNVTDNNADNEFSLNIDLFQNKNFEDLTDQNGDGVINNEGLLKSLEDTVKTFNEVFGIKKDNNPLLVYGNIANFRLFLFESKESYQKYLSGDHDAHIPGGGVAQFSDNNYISNMYSHAENARSDFNGDKEGNCKDYNYVIKHELVHALTFYLTSKL-DLGKVLMEGLAEYVTHLTEGEK----PADFAK--LVG------EEY-KEHTLEEIIK--------G--AVDPYQTGAAIIAYIEETYP--NFIDNLL----YAATEDRKTLNGRFYFKEMMQKIYQSEEDKIQK-GEGFSNWVKTYSSAENITIEPGHAQHEQQAVGNEKDEAQSYSSKGQVSEDRTEVHPTGSFRGLEVPKKPVIHEQNKGQENIVLKDTILKIEKSYERDSEGKHKANVIIDYYDMKALYDRVAGAKKQSVLKFWNKLAESEYKVGALSEDKYYFKDGKFVIHDSNEKKLVVLPEDKVSIKIMKDGNHYDLAISNKEGKVISSITKIDNLNYELLLDISDFSLEAQDSTTFSDQHNEYDLYLENGLVKMFDCASDHIYHDHSLI |
| 3U9W Chain:A ((288-451)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSI---TTDDWKDFLYSYFKDKVDV--LNQVDWNAWLYSPGLPPIKPNYDMTLTNACIALSQRWITAKEDDLNSFNATDLKDLSSHQLNEFLAQTLQRAPLPLGHIKRMQEVYNFNAINNSEIRFRWLRLCIQSKWEDAIPLALKMATEQGRMKFTRPLFKDLAAFDKSHDQAVRTYQEHKASMHPVTAMLVGKDLKVD------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U9W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20879 for 933 contacts (-22.4/contact) +
2D Compatibility (PS) -13596 + (NN) 302 + (LL) 29964
1D Compatibility (HY) -7200 + (ID) 1250
Total energy: -12659.0 ( -13.57 by residue)
QMean score : 0.196
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