Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSLKELSLRIKNIRSVQKTTKIMQMVSAAKLLQSQKKLSNSKLYISKLHDIISSIMSSADQELLAKIFTTGDNDSYLVFIIASDRGLCGSFNSSIAKSSQEYVNKLIASSKKVDIVFLGKKAFDIGKNRFDSKSILKIENSKGITLKRV--------EALVDSMDL--SKYDRIKVFYNKFYNTFT----QKPM--LETIKPWSKSSSLIDDYLTNSTIDYNYKYEPQNTEFILRSLIQNYVVTALYSALLESAASENSARMAAMESANRNTKEMLNKLALLYNCSRQAAITTDLIEVIGGAESL |
| 1H8E Chain:G ((2-272)) | --TLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVY---------GVGSLALYEK-ADI---------LIIGVSSDRGLCGAIHSSVAKQMKSEAANL----KEVKIIGVGDKIRSI-LH----------------TFKEVGRRPPTFGDASVIALELLN----EGSIIFNRFRSVISYKTEEKPIFSLDTISS-AESMSIYDD------IDAD----------VLRNYQEYSLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H8E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51202 for 1562 contacts (-32.8/contact) +
2D Compatibility (PS) -24881 + (NN) -10727 + (LL) 3144
1D Compatibility (HY) -17600 + (ID) 4700
Total energy: -105966.0 ( -67.84 by residue)
QMean score : 0.428
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