Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLSIIVIIGIFIITGCDWQRTSKEPSKNAQNQQVIKIGYLPITHSANLMMTKKLLSQYN-HP--KYKLELVKFNNWPDLMDALNSGRIDGASTLIELAMKSKQKGSNIKAVAL--GHHEGNVIMGQK--GMH-LNEFNNGDDYHFGIPHRYSTHYLLLEELRKQLKIKPGHFSYHEMSPAEMPAALSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDAYCCVLVLRGELLDQHKDVAQAFVQDYKKSGFKMND-RKQSVDIMTHHFKQSRDVLTQSAAWTSY---G-DLTIKPSGYQEITTLVKQHHLF-NPPAYDDFVEPSLYKEASRS |
| 2X26 Chain:A ((2-294)) | ---------------------------------PEALRIGYQKG--SIGMVLAKS--HQLLEKRYPESKISWVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIKTVADL---KGHKVAFQ-KGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTDL--NQTGSFYLAARPYAEKNGAFIQGVLATFSEADALTRSQREQSIALLAKTMGLPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPKKVDIRQRIWQPTQLEGKQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X26.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81328 for 2297 contacts (-35.4/contact) +
2D Compatibility (PS) -29864 + (NN) -12203 + (LL) 2724
1D Compatibility (HY) -10000 + (ID) 2300
Total energy: -132971.0 ( -57.89 by residue)
QMean score : 0.498
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