Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVKLTTKIASLKLFASYAIATYILVMLTSALNLFKGYVADTFYIAETLLIILTIILIIILTTEQTWKHHDLWRRIVEVLLLLMALTGNVFTLLMFVSIRRYQRTSQIHSYNGWESFIRKTTRHRIAIIGLLILVYMLTLSIVSQFTFDTTLATKNQFNALLHGPSLAYPFGTDDFGRDLFTRVVVGTKLTFSISIISVVIAVIFGVLLGTIAGYFNH--------IDNLIMRILDVVFAIPSLLLAVAIIASFGASIPN------LIIALSIGNIPSFARTMRASVLEIKRMEYVDAARITGENTWNIIWRYILPNAIAPMIVRFSLNIGVVVLTTSSLSFLGLGVAPDVAEWGNILRTGSNYLETHSNLAIVPGVCIMFVVLAFNFIGDAVRDALDPRIH |
3DHW Chain:A ((6-208)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPT-GLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGY-------NATVMNTVLVLLVILVYLIQFAGD----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DHW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -147841 for 1372 contacts (-107.8/contact) +
2D Compatibility (PS) -19047 + (NN) 3871 + (LL) 18732
1D Compatibility (HY) -17600 + (ID) 1800
Total energy: -163685.0 ( -119.30 by residue)
QMean score : 0.223
|
|
|