Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINHLALNTPYFGILLSVIPFFLATILFEKTNRFFLFAPLFVSMVFGVAFLYLTGIPYKTYKIGGDIIYFFLEPATICFAIPLYKKREVLVKHWHRIIGGIGIGTVVALLIILTFAKLAQFANDVILSMLPQAATTAIALPVSAGIGGIKELT--SLAVILNGVIIYALGNKFLKLFRITNPIARG--LALGTSGHTLGVAPAKELGPVEESMASIA---LVLVGVVVVAVVPVFVAIFF
1Q3I Chain:A ((1-214))
--------------MMTVAHMWFDNQIHEADTTTFDKRSPTWTALSRIAGLCNRA--VFKRDTAGD-------ASESALLKCIELSCGSVRKMRDR------------------NPKVAEISYQLSIHEREDNPQSHVLVMK----GAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHHH---
General information:
TITO was launched using:
RESULT:
Template:
1Q3I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -208118 for 1453 contacts (-143.2/contact) +
2D Compatibility (PS) -18701 + (NN) 2195 + (LL) 4380
1D Compatibility (HY) 2000 + (ID) 1000
Total energy: -219244.0 ( -150.89 by residue)
QMean score : 0.208
(partial model without unconserved sides chains):
PDB file :
Tito_1Q3I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q3I-query.scw
PDB file :
Tito_Scwrl_1Q3I.pdb
: